The Proteolysis MAP is a resource for proteolytic networks and pathways. PMAP is comprised of five databases, linked together in one environment. SubstrateDB contains molecular information on documented protease substrates.
pmap.substratedb
Local identifiers in SubstrateDB should match this
regular expression:
^\d+$
Compact URIs (CURIEs) constructed from SubstrateDB should match
this regular expression:
^pmap\.substratedb:\d+$
The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for this resource with 1 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
PMAP.SUBSTRATEDB
|
|
Identifiers.org | miriam |
pmap.substratedb
|
|
N2T | n2t |
pmap.substratedb
|
|
Prefix Commons | prefixcommons |
pmap.substratedb
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
pmap.substratedb:1915
is used to demonstrate the provides available for
this resource. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Name | Metaprefix | URI |
---|---|---|
SubstrateDB | pmap.substratedb |
http://substrate.burnham.org/protein/annotation/1915/html |
Bioregistry | bioregistry |
https://bioregistry.io/pmap.substratedb:1915 |
Identifiers.org | miriam |
https://identifiers.org/pmap.substratedb:1915 |
Name-to-Thing | n2t |
https://n2t.net/pmap.substratedb:1915 |
Additional providers curated in the Bioregistry are listed here.
Code | Name | URL |
---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/pmap.substratedb:1915 |