The Topology Data Bank of Transmembrane Proteins (TOPDB) is a collection of transmembrane protein datasets containing experimentally derived topology information. It contains information gathered from the literature and from public databases availableon transmembrane proteins. Each record in TOPDB also contains information on the given protein sequence, name, organism and cross references to various other databases.

Prefix

topdb

Keywords

protein

Links

Homepage

Contact

Missing Contact

Pattern for Local Unique Identifiers

Local identifiers in Topology Data Bank of Transmembrane Proteins should match this regular expression:
^[A-Z0-9]+$

Example Local Unique Identifier

AP00378   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Topology Data Bank of Transmembrane Proteins should match this regular expression:
^topdb:[A-Z0-9]+$

Example CURIE

topdb:AP00378

The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for this resource with 2 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier AP00378 is used to demonstrate the providers available for Topology Data Bank of Transmembrane Proteins. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.