Toxin and Toxin Target Database (T3DB) is a bioinformatics resource that combines detailed toxin data with comprehensive toxin target information.

Prefix
t3db
Keywords
biomedical science life science molecule protein
Links
Homepage
Contact
David Wishart   0000-0002-3207-2434
Pattern for Local Unique Identifiers

Local identifiers in Toxin and Toxin Target Database should match this regular expression:
^T3D\d+$

Example Local Unique Identifier
T3D0001   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Toxin and Toxin Target Database should match this regular expression:
^t3db:T3D\d+$

Example CURIE
t3db:T3D0001
Publications
Metaregistry Toxin and Toxin Target Database

The metaregistry provides mappings between the Bioregistry and other registries. There are 8 mappings to external registries for this resource with 5 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext T3DB
EDAM EDAM Ontology logo edam 2662
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.psn0h2
Identifiers.org Identifiers.org logo miriam t3db
N2T Name-to-Thing logo n2t t3db
Pathguide Pathguide logo pathguide 326
Prefix Commons Prefix Commons logo prefixcommons t3db
re3data Registry of Research Data Repositories logo re3data r3d100012189
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier T3D0001 is used to demonstrate the providers available for Toxin and Toxin Target Database. A guide for curating additional providers can be found here.

Name Metaprefix URI
Toxin and Toxin Target Database t3db http://www.t3db.org/toxins/T3D0001
Bioregistry bioregistry https://bioregistry.io/t3db:T3D0001
Identifiers.org miriam https://identifiers.org/t3db:T3D0001
Name-to-Thing n2t https://n2t.net/t3db:T3D0001
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/t3db:T3D0001