The number of known protein sequences exceeds those of experimentally solved protein structures. Homology (or comparative) modeling methods make use of experimental protein structures to build models for evolutionary related proteins. The Protein Model Portal (PMP) provides a single portal to access these models, which are accessed through their UniProt identifiers.

This resource is a provider. This means that while it may have its own prefix, it actually reuses the identifiers provided by the uniprot prefix. For all use cases, you should use uniprot instead of pmp.

Prefix

pmp

Keywords

prediction protein structure

Links

Homepage

Contact

Torsten Schwede   0000-0003-2715-335X

Pattern for Local Unique Identifiers

Local identifiers in Protein Model Portal should match this regular expression:
^([A-N,R-Z][0-9][A-Z][A-Z, 0-9][A-Z, 0-9][0-9])|([O,P,Q][0-9][A-Z, 0-9][A-Z, 0-9][A-Z, 0-9][0-9])$

Example Local Unique Identifier

Q0VCA6   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Protein Model Portal should match this regular expression:
^pmp:([A-N,R-Z][0-9][A-Z][A-Z, 0-9][A-Z, 0-9][0-9])|([O,P,Q][0-9][A-Z, 0-9][A-Z, 0-9][A-Z, 0-9][0-9])$

Example CURIE

pmp:Q0VCA6

Publications

2008 The Protein Model Portal

A summary of the relations in the Bioregistry schema can be found here.

Provides

uniprot

The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for this resource with 2 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier Q0VCA6 is used to demonstrate the providers available for Protein Model Portal. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.