The PeptideAtlas Project provides a publicly accessible database of peptides identified in tandem mass spectrometry proteomics studies and software tools.
- Prefix
peptideatlas- Keywords
- mass spectrometry protein proteomics structure
- Links
- Homepage
- Contact
- Eric W. Deutsch 0000-0001-8732-0928 edeutsch
- Pattern for Local Unique Identifiers
-
Local identifiers in PeptideAtlas should match this regular expression:
^PAp[0-9]{8}$ - Example Local Unique Identifier
- PAp00000009 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from PeptideAtlas should match this regular expression:
^peptideatlas:PAp[0-9]{8}$ - Example CURIE
- peptideatlas:PAp00000009
- Publications
Metaregistry PeptideAtlas
The metaregistry provides mappings between the Bioregistry and other registries. There are 9 mappings to external registries for this resource with 6 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
PEPTIDEATLAS
|
|
EDAM
|
edam |
2626
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.dvyrsz
|
|
Integbio
|
integbio |
nbdc01812
|
|
Identifiers.org
|
miriam |
peptideatlas
|
|
N2T
|
n2t |
peptideatlas
|
|
Prefix Commons
|
prefixcommons |
peptideatlas
|
|
re3data
|
re3data |
r3d100010889
|
|
UniProt
|
uniprot |
DB-0071
|
Providers
Providers are various services that resolve CURIEs to URLs. The example CURIE
peptideatlas:PAp00000009
is used to demonstrate the provides available for
this resource. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Extra Providers
Additional providers curated in the Bioregistry are listed here.
| Code | Name | URL |
|---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/peptideatlas:PAp00000009 |