NextDb is a database that provides information on the expression pattern map of the 100Mb genome of the nematode Caenorhabditis elegans. This was done through EST analysis and systematic whole mount in situ hybridization. Information available includes 5' and 3' ESTs, and in-situ hybridization images of 11,237 cDNA clones.
nextdb
Local identifiers in Nematode Expression Pattern DataBase should match this
regular expression:
^[A-Za-z0-9]+$
Compact URIs (CURIEs) constructed from Nematode Expression Pattern DataBase should match
this regular expression:
^nextdb:[A-Za-z0-9]+$
The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for this resource with 3 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
NEXTDB
|
|
FAIRSharing | fairsharing |
FAIRsharing.xz5m1a
|
|
Integbio | integbio |
nbdc00594
|
|
Identifiers.org | miriam |
nextdb
|
|
N2T | n2t |
nextdb
|
|
NCBI | ncbi |
NextDB
|
|
Prefix Commons | prefixcommons |
nextdb
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
nextdb:6b1
is used to demonstrate the provides available for
this resource. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Additional providers curated in the Bioregistry are listed here.
Code | Name | URL |
---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/nextdb:6b1 |