Identifier Standards
Pattern for Local Unique Identifiers

Local identifiers in GeneCards Gene should match this regular expression:
^[A-Za-z-0-9_]+(\@)?$

Example Local Unique Identifier
ABL1   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from GeneCards Gene should match this regular expression:
^genecards\.gene:[A-Za-z-0-9_]+(\@)?$

Example CURIE
genecards.gene:ABL1
Contacts
Contact
Missing Contact
Ontology

A summary of the relations in the Bioregistry schema can be found here.

In Collection (1)
Synapse.org external links
Mappings to External Registries

Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 7 mappings to external registries with 4 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext GENECARDS
Integbio Integbio logo integbio nbdc00242
Identifiers.org Identifiers.org logo miriam genecards
N2T Name-to-Thing logo n2t genecards
Prefix Commons Prefix Commons logo prefixcommons genecards
re3data Registry of Research Data Repositories logo re3data r3d100012015
UniProt UniProt Cross-ref database logo uniprot DB-0030
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier ABL1 is used to demonstrate the providers available for GeneCards Gene. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Provider Name Provider Code URI
GeneCards Gene genecards.gene https://www.genecards.org/cgi-bin/carddisp.pl?gene=ABL1
Bioregistry bioregistry https://bioregistry.io/genecards.gene:ABL1
Identifiers.org miriam https://identifiers.org/genecards:ABL1
Name-to-Thing n2t https://n2t.net/genecards:ABL1
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.

Provider Name Provider Code URL
Bio2RDF bio2rdf http://bio2rdf.org/genecards:ABL1