The GeneCards human gene database stores gene related transcriptomic, genetic, proteomic, functional and disease information. It uses standard nomenclature and approved gene symbols. GeneCards presents a complete summary for each human gene.
genecards.gene
Local identifiers in GeneCards Gene should match this
regular expression:
^[A-Za-z-0-9_]+(\@)?$
Compact URIs (CURIEs) constructed from GeneCards Gene should match
this regular expression:
^genecards\.gene:[A-Za-z-0-9_]+(\@)?$
A summary of the relations in the Bioregistry schema can be found here.
The metaregistry provides mappings between the Bioregistry and other registries. There are 8 mappings to external registries for this resource with 5 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
GENECARDS
|
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.g7jbvn
|
|
Integbio
|
integbio |
nbdc00242
|
|
Identifiers.org
|
miriam |
genecards
|
|
N2T
|
n2t |
genecards
|
|
|
Prefix Commons
|
prefixcommons |
genecards
|
|
re3data
|
re3data |
r3d100012015
|
|
|
UniProt
|
uniprot |
DB-0030
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier ABL1 is used to demonstrate the providers
available for GeneCards Gene. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Name | Metaprefix | URI |
|---|---|---|
| GeneCards Gene | genecards.gene |
https://www.genecards.org/cgi-bin/carddisp.pl?gene=ABL1 |
| Bioregistry | bioregistry |
https://bioregistry.io/genecards.gene:ABL1 |
| Identifiers.org | miriam |
https://identifiers.org/genecards:ABL1 |
| Name-to-Thing | n2t |
https://n2t.net/genecards:ABL1 |
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
| Code | Name | URL |
|---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/genecards:ABL1 |