A database that describes manually curated macromolecular complexes and provides links to details about these complexes in other databases.
- Prefix
complexportal- Alternative Prefixes
- ComplexPortal
- Keywords
- complex ontology protein protein complex protein-protein interaction databases
- License
- CC0-1.0
- Links
- Homepage OBO OWL OBO JSON
- Publications
- 2025 Complex portal 2025: predicted human complexes and enhanced visualisation tools for the comparison of orthologous and paralogous complexes
- https://bioregistry.io/pubmed:30357405
- 2014 The complex portal--an encyclopaedia of macromolecular complexes
Identifier Standards
- Pattern for Local Unique Identifiers
-
Local identifiers in Complex Portal should match this regular expression:
^CPX-[0-9]+$ - Example Local Unique Identifier
- CPX-263 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from Complex Portal should match this regular expression:
^complexportal:CPX-[0-9]+$ - Example CURIE
- complexportal:CPX-263
Contacts
- Contact
-
Sucharitha Balu
0000-0001-7456-0594
CP-SB
-
Juan Jose Medina Reyes
0009-0004-6468-260X
jmedinaebi
- Identifier Space Owner
-
European Bioinformatics Institute
Ontology
A summary of the relations in the Bioregistry schema can be found here.
- In Collection (1)
- Synapse.org external links
Mappings to External Registries
Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 9 mappings to external registries with 4 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
COMPLEXPORTAL
|
|
Biolink
|
biolink |
ComplexPortal
|
|
GO
|
go |
ComplexPortal
|
|
Identifiers.org
|
miriam |
complexportal
|
|
N2T
|
n2t |
complexportal
|
|
Prefix Commons
|
prefixcommons |
complexportal
|
|
re3data
|
re3data |
r3d100013295
|
|
UniProt
|
uniprot |
DB-0228
|
|
Wikidata
|
wikidata |
P7718
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier CPX-263 is used to demonstrate the providers
available for Complex Portal. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Provider Name | Provider Code | URI |
|---|---|---|
| Complex Portal | complexportal |
https://www.ebi.ac.uk/complexportal/complex/CPX-263 |
| Bioregistry | bioregistry |
https://bioregistry.io/complexportal:CPX-263 |
| Identifiers.org | miriam |
https://identifiers.org/complexportal:CPX-263 |
| Name-to-Thing | n2t |
https://n2t.net/complexportal:CPX-263 |
Extra Providers
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
| Provider Name | Provider Code | URL |
|---|---|---|
| Bio2RDF | bio2rdf |
http://bio2rdf.org/complexportal:CPX-263 |