The bacterial tyrosine kinase database (BYKdb) that collects sequences of putative and authentic bacterial tyrosine kinases, providing structural and functional information.

This resource is a provider. This means that while it may have its own prefix, it actually reuses the identifiers provided by the uniprot prefix. For all use cases, you should use uniprot instead of bykdb.

Prefix

bykdb

Keywords

domain life science microbial sequence

Links

Homepage

Contact

Alain J. Cozzone

Pattern for Local Unique Identifiers

Local identifiers in Bacterial Tyrosine Kinase Database should match this regular expression:
^[A-Z0-9]+$

Example Local Unique Identifier

A0A009E7X8   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Bacterial Tyrosine Kinase Database should match this regular expression:
^bykdb:[A-Z0-9]+$

Example CURIE

bykdb:A0A009E7X8

Publications

• 1997 Characterization of a bacterial gene encoding an autophosphorylating protein tyrosine kinase
• 2011 BYKdb: the Bacterial protein tYrosine Kinase database
• 2009 Tyrosine-kinases in bacteria: from a matter of controversy to the status of key regulatory enzymes
• 2008 Identification of the idiosyncratic bacterial protein tyrosine kinase (BY-kinase) family signature

A summary of the relations in the Bioregistry schema can be found here.

Provides

uniprot

The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for this resource with 2 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier A0A009E7X8 is used to demonstrate the providers available for Bacterial Tyrosine Kinase Database. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.