Identifier Standards
Pattern for Local Unique Identifiers

Local identifiers in Genatlas should match this regular expression:
^\w+$

Example Local Unique Identifier
HBB   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Genatlas should match this regular expression:
^genatlas:\w+$

Example CURIE
genatlas:HBB
Contacts
Contact
Missing Contact
Mappings to External Registries

Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 6 mappings to external registries with 3 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext GENATLAS
Integbio Integbio logo integbio nbdc00275
Identifiers.org Identifiers.org logo miriam genatlas
N2T Name-to-Thing logo n2t genatlas
Prefix Commons Prefix Commons logo prefixcommons genatlas
UniProt UniProt Cross-ref database logo uniprot DB-0027
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier HBB is used to demonstrate the providers available for Genatlas. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Provider Name Provider Code URI
Genatlas genatlas http://genatlas.medecine.univ-paris5.fr/fiche.php?symbol=HBB
Bioregistry bioregistry https://bioregistry.io/genatlas:HBB
Identifiers.org miriam https://identifiers.org/genatlas:HBB
Name-to-Thing n2t https://n2t.net/genatlas:HBB
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.

Provider Name Provider Code URL
Bio2RDF bio2rdf http://bio2rdf.org/genatlas:HBB