Identifier of an entry from the AAindex database.
- Prefix
aaindex- Keywords
- protein sequence
- Links
- Homepage
- Publications
- https://bioregistry.io/pubmed:9847231
- https://bioregistry.io/pubmed:9053899
- https://bioregistry.io/pubmed:3244698
- 2007 AAindex: amino acid index database, progress report 2008
- https://bioregistry.io/pubmed:10592278
- References
- GitHub PR https://github.com/biopragmatics/bioregistry/pull/1098
Identifier Standards
- Pattern for Local Unique Identifiers
- Missing LUI pattern
- Example Local Unique Identifier
- BUNA790102 Resolve
- Example CURIE
- aaindex:BUNA790102
Contacts
- Contact
-
Shuichi Kawashima
0000-0001-7883-3756
skwsm
- Contributors
-
contributor
Sumir H Pandit
0000-0002-1216-4761
sumirp
- Reviewer
-
Charles Tapley Hoyt
0000-0003-4423-4370
cthoyt
Mappings to External Registries
Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 4 mappings to external registries with 4 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
EDAM
|
edam |
1128
|
|
Integbio
|
integbio |
nbdc00004
|
|
Prefix Commons
|
prefixcommons |
aaindex
|
|
Wikidata (E)
|
wikidata.entity |
Q85738825
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier BUNA790102 is used to demonstrate the providers
available for AAindex. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Provider Name | Provider Code | URI |
|---|---|---|
| AAindex | aaindex |
http://www.genome.jp/dbget-bin/www_bget?aaindex:BUNA790102 |
| Bioregistry | bioregistry |
https://bioregistry.io/aaindex:BUNA790102 |
Extra Providers
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
| Provider Name | Provider Code | URL |
|---|---|---|
| Bio2RDF | bio2rdf |
http://bio2rdf.org/aaindex:BUNA790102 |