Registry Vertebrate Gene Nomenclature Committee Database

The Vertebrate Gene Nomenclature Committee (VGNC) is an extension of the established HGNC (HUGO Gene Nomenclature Committee) project that names human genes. VGNC is responsible for assigning standardized names to genes in vertebrate species that currently lack a nomenclature committee.

Prefix
vgnc
Keywords
gene genome/gene life science ontology/terminology/nomenclature organism-specific databases protein
Links
Homepage
Publications
2021 Genenames.org: the HGNC and VGNC resources in 2021
Identifier Standards
Pattern for Local Unique Identifiers

Local identifiers in Vertebrate Gene Nomenclature Committee Database should match this regular expression:
^\d{1,9}$

Example Local Unique Identifier
3792   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Vertebrate Gene Nomenclature Committee Database should match this regular expression:
^vgnc:\d{1,9}$

Example CURIE
vgnc:3792
Mappings to External Registries

Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 7 mappings to external registries with 4 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
Cellosaurus Cellosaurus Registry logo cellosaurus VGNC
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.5NhJFK
Integbio Integbio logo integbio nbdc02624
Identifiers.org Identifiers.org logo miriam vgnc
NCBI National Center for Biotechnology Information Registry logo ncbi VGNC
TogoID togoid Vgnc
UniProt UniProt Cross-ref database logo uniprot DB-0226
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 3792 is used to demonstrate the providers available for Vertebrate Gene Nomenclature Committee Database. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Provider Name Provider Code URI
Vertebrate Gene Nomenclature Committee Database vgnc https://vertebrate.genenames.org/data/gene-symbol-report/#!/vgnc_id/3792
Bioregistry bioregistry https://bioregistry.io/vgnc:3792
Identifiers.org miriam https://identifiers.org/vgnc:3792