The Arabidopsis Information Resource (TAIR) maintains a database of genetic and molecular biology data for the model higher plant Arabidopsis thaliana. This provides protein information for a given gene model and provides links to other sources such as UniProtKB and GenPept
tair.protein
Local identifiers in TAIR Protein should match this
regular expression:
^\d{10}$
Compact URIs (CURIEs) constructed from TAIR Protein should match
this regular expression:
^tair\.protein:\d{10}$
AASequence:
.
Therefore, you may see local unique identifiers for this resource that look like
AASequence:1009107926
(instead of the canonical form 1009107926
) and CURIEs for this resource that look like
tair.protein:AASequence:1009107926
(instead of the canonical form tair.protein:1009107926
).
The Bioregistry will automatically strip off the banana when standardizing local unique identifiers and CURIEs.
The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for this resource with 1 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
TAIR.PROTEIN
|
|
Identifiers.org
![]() |
miriam |
tair.protein
|
|
N2T
![]() |
n2t |
tair.protein
|
|
Prefix Commons
|
prefixcommons |
tair.protein
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier 1009107926
is used to demonstrate the providers
available for TAIR Protein. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
Name | Metaprefix | URI |
---|---|---|
TAIR Protein | tair.protein |
https://www.arabidopsis.org/protein?key=1009107926 |
Bioregistry | bioregistry |
https://bioregistry.io/tair.protein:1009107926 |
Identifiers.org | miriam |
https://identifiers.org/tair.protein:AASequence:1009107926 |
Name-to-Thing | n2t |
https://n2t.net/tair.protein:1009107926 |
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
Code | Name | URL |
---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/tair.protein:1009107926 |
legacy |
Legacy | http://arabidopsis.org/servlets/TairObject?accession=AASequence:1009107926 |