SUPERFAMILY provides structural, functional and evolutionary information for proteins from all completely sequenced genomes, and large sequence collections such as UniProt.

Prefix

supfam

Keywords

classification genome protein structure

Links

Homepage

Contact

Arun Prasad Pandurangan   0000-0001-7168-7143

Pattern for Local Unique Identifiers

Local identifiers in SUPERFAMILY should match this regular expression:
^\w+$

Example Local Unique Identifier

SSF57615   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from SUPERFAMILY should match this regular expression:
^supfam:\w+$

Example CURIE

supfam:SSF57615

Publications

• https://bioregistry.io/pubmed:30445555
• 2001 Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure

The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for this resource with 3 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier SSF57615 is used to demonstrate the providers available for SUPERFAMILY. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.