Registry Yeast Deletion and the Mitochondrial Proteomics Project

The YDPM database serves to support the Yeast Deletion and the Mitochondrial Proteomics Project. The project aims to increase the understanding of mitochondrial function and biogenesis in the context of the cell. In the Deletion Project, strains from the deletion collection were monitored under 9 different media conditions selected for the study of mitochondrial function. The YDPM database contains both the raw data and growth rates calculated for each strain in each media condition.

Prefix
ydpm
Keywords
protein
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in Yeast Deletion and the Mitochondrial Proteomics Project should match this regular expression:
^Y[A-Z]{2}\d+[CW]$

Example Local Unique Identifier
YAL001C   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Yeast Deletion and the Mitochondrial Proteomics Project should match this regular expression:
^ydpm:Y[A-Z]{2}\d+[CW]$

Example CURIE
ydpm:YAL001C
Metaregistry Yeast Deletion and the Mitochondrial Proteomics Project

The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for this resource with 1 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext YDPM
Identifiers.org Identifiers.org logo miriam ydpm
N2T Name-to-Thing logo n2t ydpm
Prefix Commons Prefix Commons logo prefixcommons ydpm
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE ydpm:YAL001C is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Yeast Deletion and the Mitochondrial Proteomics Project ydpm http://www-deletion.stanford.edu/cgi-bin/YDPM/YDPM_search.cgi?thelist=YAL001C
Bioregistry bioregistry https://bioregistry.io/ydpm:YAL001C
Identifiers.org miriam https://identifiers.org/ydpm:YAL001C
Name-to-Thing n2t https://n2t.net/ydpm:YAL001C
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/ydpm:YAL001C