The Virus Pathogen Database and Analysis Resource (ViPR) supports bioinformatics workflows for a broad range of human virus pathogens and other related viruses. It provides access to sequence records, gene and protein annotations, immune epitopes, 3D structures, and host factor data. This collection references viral strain information.

Prefix

vipr

Keywords

biomedical science epidemiology genomics immunology life science proteomics virology

Links

Homepage Repository

Contact

Richard Scheuermann   0000-0003-1355-892X

Pattern for Local Unique Identifiers

Local identifiers in Virus Pathogen Resource should match this regular expression:
^[A-Za-z 0-9]+$

Example Local Unique Identifier

BeAn 70563   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Virus Pathogen Resource should match this regular expression:
^vipr:[A-Za-z 0-9]+$

Example CURIE

vipr:BeAn 70563

Publications

• 2012 Virus pathogen database and analysis resource (ViPR): a comprehensive bioinformatics database and analysis resource for the coronavirus research community.
• 2011 ViPR: an open bioinformatics database and analysis resource for virology research.
• 2021 Database and Analytical Resources for Viral Research Community
• 2017 Virus Databases ☆

The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for vipr with 3 unique external prefixes.

Providers are various services that resolve CURIEs to URLs. The example CURIE vipr:BeAn 70563 is used to demonstrate the provides available for vipr. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.