Database of validation results for ligands and non-standard residues in the Protein Data Bank.
This resource is a provider. This means that
while it may have its own prefix, it actually reuses the identifiers provided by the
pdb
prefix. For all use cases, you should use pdb
instead of validatordb
.
validatordb
Local identifiers in ValidatorDB should match this
regular expression:
^[A-Za-z0-9\/]+$
Compact URIs (CURIEs) constructed from ValidatorDB should match
this regular expression:
^validatordb:[A-Za-z0-9\/]+$
The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for this resource with 2 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
VALIDATORDB
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.c9psgb
|
|
Identifiers.org
![]() |
miriam |
validatordb
|
|
N2T
![]() |
n2t |
validatordb
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
None:2h6o
is used to demonstrate the provides available for
this resource. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Name | Metaprefix | URI |
---|---|---|
ValidatorDB | validatordb |
https://webchem.ncbr.muni.cz/Platform/ValidatorDb/ByStructure/2h6o |
Bioregistry | bioregistry |
https://bioregistry.io/validatordb:2h6o |
Identifiers.org | miriam |
https://identifiers.org/validatordb:2h6o |
Name-to-Thing | n2t |
https://n2t.net/validatordb:2h6o |