The UniProt Archive (UniParc) is a database containing non-redundant protein sequence information from many sources. Each unique sequence is given a stable and unique identifier (UPI) making it possible to identify the same protein from different source databases.
uniparc
Local identifiers in UniProt Archive should match this
regular expression:
^UPI[A-F0-9]{10}$
Compact URIs (CURIEs) constructed from UniProt Archive should match
this regular expression:
^uniparc:UPI[A-F0-9]{10}$
The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for this resource with 3 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
UNIPARC
|
|
EDAM | edam |
2392
|
|
GO | go |
UniParc
|
|
Identifiers.org | miriam |
uniparc
|
|
N2T | n2t |
uniparc
|
|
Prefix Commons | prefixcommons |
uniparc
|
|
re3data | re3data |
r3d100011519
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier UPI000000000A
is used to demonstrate the providers
available for UniProt Archive. A guide for curating additional providers can be found
here.
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
Code | Name | URL |
---|---|---|
CURATOR_REVIEW |
UniParc through UniProt | https://www.uniprot.org/uniparc/UPI000000000A |
bio2rdf |
Bio2RDF | http://bio2rdf.org/uniparc:UPI000000000A |