SSToSS is a database which provides sequence-structural templates of single member protein domain superfamilies like PASS2. Sequence-structural templates are recognized by considering the content and overlap of sequence similarity and structural parameters like, solvent inaccessibility, secondary structural content, hydrogen bonding and spatial packing of the residues among the protein of single member superfamilies.
Identifier Standards
- Pattern for Local Unique Identifiers
- Missing LUI pattern
- Example Local Unique Identifier
- 01.01.005 Resolve
- Example CURIE
- sstoss:01.01.005
Contacts
- Contact
- Missing Contact
- Reviewer
-
Charles Tapley Hoyt
0000-0003-4423-4370
cthoyt
Mappings to External Registries
Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 1 mapping to an external registry.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
Prefix Commons
|
prefixcommons |
sstoss
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier 01.01.005 is used to demonstrate the providers
available for Sequence-Structural Templates of Single-member Superfamilies. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Provider Name | Provider Code | URI |
|---|---|---|
| Sequence-Structural Templates of Single-member Superfamilies | sstoss |
http://caps.ncbs.res.in/cgi-bin/mini/databases/SSTOSS/sstoss.cgi?code=01.01.005 |
| Bioregistry | bioregistry |
https://bioregistry.io/sstoss:01.01.005 |
Extra Providers
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
| Provider Name | Provider Code | URL |
|---|---|---|
| Bio2RDF | bio2rdf |
http://bio2rdf.org/sstoss:01.01.005 |