The Simple Modular Architecture Research Tool (SMART) is an online tool for the identification and annotation of protein domains, and the analysis of domain architectures.

Prefix

smart

Keywords

3d structure chemical structure classification domain family and domain databases life science multiple sequence alignment protein protein domain structure

License

CC-BY-SA-3.0

Links

Homepage

Publications

1999 SMART: identification and annotation of domains from signalling and extracellular protein sequences

https://bioregistry.io/pubmed:9600884

https://bioregistry.io/pubmed:41062452

2018 20 years of the SMART protein domain annotation resource

2014 SMART: recent updates, new developments and status in 2015

2011 SMART 7: recent updates to the protein domain annotation resource

2008 SMART 6: recent updates and new developments

2006 SMART 5: domains in the context of genomes and networks

2004 SMART 4.0: towards genomic data integration

2002 Recent improvements to the SMART domain-based sequence annotation resource

2000 SMART: a web-based tool for the study of genetically mobile domains

1999 Protein families in multicellular organisms

Pattern for Local Unique Identifiers

Local unique identifiers in Simple Modular Architecture Research Tool should match this regular expression:
^SM\d{5}$

Example Local Unique Identifier

SM00015   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Simple Modular Architecture Research Tool should match this regular expression:
^smart:SM\d{5}$

Example CURIE

smart:SM00015

Contact

Chris P. Ponting   0000-0003-0202-7816

Identifier Space Owner

EMBL, Heidelberg

Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 10 mappings to external registries with 5 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier SM00015 is used to demonstrate the providers available for Simple Modular Architecture Research Tool. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.