The SCOP (Structural Classification of Protein) database is a comprehensive ordering of all proteins of known structure according to their evolutionary, functional and structural relationships. The basic classification unit is the protein domain. Domains are hierarchically classified into species, proteins, families, superfamilies, folds, and classes.
scop
Local identifiers in Structural Classification of Protein should match this
regular expression:
^\d+$
Compact URIs (CURIEs) constructed from Structural Classification of Protein should match
this regular expression:
^scop:\d+$
The metaregistry provides mappings between the Bioregistry and other registries. There are
5 mappings to external registries for scop
.
Registry Name | Metaprefix | External Prefix |
---|---|---|
BioContext | biocontext |
SCOP
|
FAIRSharing
|
fairsharing |
FAIRsharing.wjzty
|
Identifiers.org
![]() |
miriam |
scop
|
Name-to-Thing
![]() |
n2t |
scop
|
Prefix Commons | prefixcommons |
scop
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
scop:
is used to demonstrate the provides available for
scop
. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Name | Metaprefix | URI |
---|---|---|
Structural Classification of Protein | scop |
http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?sunid=47419 |
Bioregistry | bioregistry |
https://bioregistry.io/scop:47419 |
Identifiers.org | miriam |
https://identifiers.org/scop:47419 |
Name-to-Thing | n2t |
https://n2t.net/scop:47419 |
None | CURATOR_REVIEW |
http://scop.berkeley.edu/sunid=47419 |
Additional providers curated in the Bioregistry are listed here.
Code | Name | URL |
---|---|---|
CURATOR_REVIEW | SCOP at Berkeley | http://scop.berkeley.edu/sunid=47419 |