The goal of the Systems Biology Ontology is to develop controlled vocabularies and ontologies tailored specifically for the kinds of problems being faced in Systems Biology, especially in the context of computational modeling. SBO is a project of the BioModels.net effort.
sbo
SBO
Local identifiers in Systems Biology Ontology should match this
regular expression:
^\d{7}$
Compact URIs (CURIEs) constructed from Systems Biology Ontology should match
this regular expression:
^sbo:\d{7}$
namespaceEmbeddedInLUI
as true. The actual
part that gets prefixed before the local unique identifier regex,
otherwise known as the banana, is
SBO:
.
Therefore, you might see local unique identifiers written out as CURIEs.
The metaregistry provides mappings between the Bioregistry and other registries. There are
10 mappings to external registries for sbo
with
2 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
AberOWL | aberowl |
SBO
|
|
BioContext | biocontext |
SBO
|
|
BioPortal Prefixes | bioportal |
SBO
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.s19src
|
|
Identifiers.org
![]() |
miriam |
sbo
|
|
Name-to-Thing
![]() |
n2t |
sbo
|
|
OBO Foundry
![]() |
obofoundry |
sbo
|
|
Ontology Lookup Service
![]() |
ols |
sbo
|
|
OntoBee | ontobee |
SBO
|
|
Prefix Commons | prefixcommons |
sbo
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
sbo:0000485
is used to demonstrate the provides available for
sbo
. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Additional providers curated in the Bioregistry are listed here.
Code | Name | URL |
---|---|---|
biomodels |
BioModels | http://biomodels.net/SBO/SBO_0000485 |