The RNA modification database provides a comprehensive listing of post-transcriptionally modified nucleosides from RNA. The database consists of all RNA-derived ribonucleosides of known structure, including those from established sequence positions, as well as those detected or characterized from hydrolysates of RNA.
- Prefix
rnamods- Keywords
- rna structure
- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
-
Local identifiers in RNA Modification Database should match this regular expression:
^\d{3}$ - Example Local Unique Identifier
- 101 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from RNA Modification Database should match this regular expression:
^rnamods:\d{3}$ - Example CURIE
- rnamods:101
Metaregistry RNA Modification Database
The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for this resource with 1 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
RNAMODS
|
|
GO
|
go |
RNAmods
|
|
Identifiers.org
|
miriam |
rnamods
|
|
N2T
|
n2t |
rnamods
|
|
Prefix Commons
|
prefixcommons |
rnamods
|
Providers
Providers are various services that resolve CURIEs to URLs. The example CURIE
rnamods:101
is used to demonstrate the provides available for
this resource. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
| Name | Metaprefix | URI |
|---|---|---|
| RNA Modification Database | rnamods |
http://mods.rna.albany.edu/mods/modifications/view/101 |
| Bioregistry | bioregistry |
https://bioregistry.io/rnamods:101 |
| Identifiers.org | miriam |
https://identifiers.org/rnamods:101 |
| Name-to-Thing | n2t |
https://n2t.net/rnamods:101 |
Extra Providers
Additional providers curated in the Bioregistry are listed here.
| Code | Name | URL |
|---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/rnamods:101 |