The RNA modification database provides a comprehensive listing of post-transcriptionally modified nucleosides from RNA. The database consists of all RNA-derived ribonucleosides of known structure, including those from established sequence positions, as well as those detected or characterized from hydrolysates of RNA.
rnamods
Local identifiers in RNA Modification Database should match this
regular expression:
^\d{3}$
Compact URIs (CURIEs) constructed from RNA Modification Database should match
this regular expression:
^rnamods:\d{3}$
The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for this resource with 1 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
RNAMODS
|
|
GO | go |
RNAmods
|
|
Identifiers.org | miriam |
rnamods
|
|
N2T | n2t |
rnamods
|
|
Prefix Commons | prefixcommons |
rnamods
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier 101
is used to demonstrate the providers
available for RNA Modification Database. A guide for curating additional providers can be found
here.
Name | Metaprefix | URI |
---|---|---|
RNA Modification Database | rnamods |
http://mods.rna.albany.edu/mods/modifications/view/101 |
Bioregistry | bioregistry |
https://bioregistry.io/rnamods:101 |
Identifiers.org | miriam |
https://identifiers.org/rnamods:101 |
Name-to-Thing | n2t |
https://n2t.net/rnamods:101 |
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
Code | Name | URL |
---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/rnamods:101 |