RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

Prefix
ricenetdb.gene
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in RiceNetDB Gene should match this regular expression:
^LOC\_Os\d{1,2}g\d{5}\.\d$

Example Local Unique Identifier
LOC_Os01g49190.1   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from RiceNetDB Gene should match this regular expression:
^ricenetdb\.gene:LOC\_Os\d{1,2}g\d{5}\.\d$

Example CURIE
ricenetdb.gene:LOC_Os01g49190.1
Metaregistry RiceNetDB Gene

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for ricenetdb.gene with 1 unique external prefixes.

Registry Name Metaprefix External Prefix
BioContext biocontext RICENETDB.GENE
Identifiers.org Identifiers.org logo miriam ricenetdb.gene
Name-to-Thing Name-to-Thing logo n2t ricenetdb.gene
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE ricenetdb.gene:LOC_Os01g49190.1 is used to demonstrate the provides available for ricenetdb.gene. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
RiceNetDB Gene ricenetdb.gene http://bis.zju.edu.cn/ricenetdb/genedetails.php?ID=LOC_Os01g49190.1
Bioregistry bioregistry https://bioregistry.io/ricenetdb.gene:LOC_Os01g49190.1
Identifiers.org miriam https://identifiers.org/ricenetdb.gene:LOC_Os01g49190.1
Name-to-Thing n2t https://n2t.net/ricenetdb.gene:LOC_Os01g49190.1