RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
ricenetdb.gene
Local identifiers in RiceNetDB Gene should match this
regular expression:
^LOC\_Os\d{1,2}g\d{5}\.\d$
Compact URIs (CURIEs) constructed from RiceNetDB Gene should match
this regular expression:
^ricenetdb\.gene:LOC\_Os\d{1,2}g\d{5}\.\d$
The metaregistry provides mappings between the Bioregistry and other registries. There are
3 mappings to external registries for ricenetdb.gene
.
Registry Name | Metaprefix | External Prefix |
---|---|---|
BioContext | biocontext |
RICENETDB.GENE
|
Identifiers.org
![]() |
miriam |
ricenetdb.gene
|
Name-to-Thing
![]() |
n2t |
ricenetdb.gene
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
ricenetdb.gene:
is used to demonstrate the provides available for
ricenetdb.gene
. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.