The Reactome project is a collaboration to develop a curated resource of core pathways and reactions in human biology.

Prefix

reactome

Alternative Prefixes

RE REACT reactome.pathway Reactome

Keywords

human pathway reaction

License

CC0-1.0

Links

Homepage

Contact

Peter D'Eustachio   0000-0002-5494-626X   deustp01

Pattern for Local Unique Identifiers

Local identifiers in Reactome should match this regular expression:
^R-[A-Z]{3}-\d+(-\d+)?(\.\d+)?$

Example Local Unique Identifier

R-BTA-418592   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Reactome should match this regular expression:
^reactome:R-[A-Z]{3}-\d+(-\d+)?(\.\d+)?$

Example CURIE

reactome:R-BTA-418592

Publications

2005 Reactome: a knowledgebase of biological pathways

References

GitHub PR https://github.com/biopragmatics/bioregistry/pull/1086

Contributors

• contributor Sierra Moxon   0000-0002-8719-7760   sierra-moxon

A summary of the relations in the Bioregistry schema can be found here.

In Collection

Global Biodata Coalition - Global Core Biodata Resources Synapse.org external links

The metaregistry provides mappings between the Bioregistry and other registries. There are 12 mappings to external registries for this resource with 8 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier R-BTA-418592 is used to demonstrate the providers available for Reactome. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.