The Reactome project is a collaboration to develop a curated resource of core pathways and reactions in human biology.

Alternative Prefixes
human pathway reaction
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in Reactome should match this regular expression:

Example Local Unique Identifier
R-BTA-418592   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Reactome should match this regular expression:

Example CURIE
2005 Reactome: a knowledgebase of biological pathways

A summary of the relations in the Bioregistry schema can be found here.

In Collection
Global Biodata Coalition - Global Core Biodata Resources
Metaregistry Reactome

The metaregistry provides mappings between the Bioregistry and other registries. There are 11 mappings to external registries for this resource with 7 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext REACTOME
CHEMINF cheminf 000411
EDAM EDAM Ontology logo edam 1155
GO Gene Ontology Registry logo go Reactome
Integbio Integbio logo integbio nbdc00185 logo miriam reactome
N2T Name-to-Thing logo n2t reactome
Pathguide Pathguide logo pathguide 103
Prefix Commons Prefix Commons logo prefixcommons reactome
re3data Registry of Research Data Repositories logo re3data r3d100010861
Wikidata Wikidata Property logo wikidata P3937

Providers are various services that resolve CURIEs to URLs. The example CURIE reactome:R-BTA-418592 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Reactome reactome
Bioregistry bioregistry miriam
Name-to-Thing n2t
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
bio2rdf Bio2RDF
pathwaycommons Pathway Commons