The Pathway Ontology captures information on biological networks, the relationships between netweorks and the alterations or malfunctioning of such networks within a hierarchical structure. The five main branches of the ontology are: classic metabolic pathways, regulatory, signaling, drug, and disease pathwaysfor complex human conditions.

Prefix
pw
Preferred Prefix
PW
Version
2019-10-23
License
CC BY 4.0
Links
Homepage Repository OBO OWL @ratgenome
Contact
G. Thomas Hayman   0000-0002-9553-7227   gthayman
Pattern for Local Unique Identifiers

Local identifiers in Pathway ontology should match this regular expression:
^\d{7}$

Example Local Unique Identifier
0000423   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Pathway ontology should match this regular expression:
^pw:\d{7}$

Example CURIE
pw:0000423
MIRIAM Namespace Embedded in LUI
The legacy MIRIAM standard for generating CURIEs with this resource includes the namespaceEmbeddedInLUI as true. The actual part that gets prefixed before the local unique identifier regex, otherwise known as the banana, is PW:. Therefore, you might see local unique identifiers written out as CURIEs.
Publications
Metaregistry Pathway ontology

The metaregistry provides mappings between the Bioregistry and other registries. There are 11 mappings to external registries for pw with 3 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
AberOWL aberowl PW
BioContext biocontext PW
BioPortal Prefixes bioportal PW
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.f73xhd
Identifiers.org Identifiers.org logo miriam pw
Name-to-Thing Name-to-Thing logo n2t pw
OBO Foundry OBO Foundry logo obofoundry pw
Ontology Lookup Service Ontology Lookup Service logo ols pw
OntoBee ontobee PW
Prefix Commons prefixcommons pw
Wikidata Property Wikidata Property logo wikidata P7333
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE pw:0000423 is used to demonstrate the provides available for pw. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Pathway ontology pw http://rgd.mcw.edu/rgdweb/ontology/annot.html?acc_id=PW:0000423
Bioregistry bioregistry https://bioregistry.io/pw:0000423
Identifiers.org miriam https://identifiers.org/PW:0000423
OBO Foundry obofoundry http://purl.obolibrary.org/obo/PW_0000423
Ontology Lookup Service ols https://www.ebi.ac.uk/ols/ontologies/pw/terms?iri=http://purl.obolibrary.org/obo/PW_0000423
Name-to-Thing n2t https://n2t.net/pw:0000423
BioPortal Prefixes bioportal https://bioportal.bioontology.org/ontologies/PW/?p=classes&conceptid=http://purl.obolibrary.org/obo/PW_0000423