Registry PIR Superfamily Classification System
The PIR SuperFamily concept is being used as a guiding principle to provide comprehensive and non-overlapping clustering of UniProtKB sequences into a hierarchical order to reflect their evolutionary relationships.
- Prefix
pirsf- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
-
Local identifiers in PIR Superfamily Classification System should match this regular expression:
^PIRSF\d{6}$ - Example Local Unique Identifier
- PIRSF000100 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from PIR Superfamily Classification System should match this regular expression:
^pirsf:PIRSF\d{6}$ - Example CURIE
- pirsf:PIRSF000100
- Publications
- 2004 PIRSF: family classification system at the Protein Information Resource.
Metaregistry PIR Superfamily Classification System
The metaregistry provides mappings between the Bioregistry and other registries. There are
8 mappings to external registries for pirsf with
4 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
PIRSF
|
|
| EDAM Ontology | edam |
1136
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.vssch2
|
|
| Gene Ontology Registry | go |
PIRSF
|
|
Identifiers.org
|
miriam |
pirsf
|
|
Name-to-Thing
|
n2t |
pirsf
|
|
| Prefix Commons | prefixcommons |
pirsf
|
|
| UniProt Cross-ref database | uniprot |
DB-0079
|
Providers
Providers are various services that resolve CURIEs to URLs. The example CURIE
pirsf:PIRSF000100
is used to demonstrate the provides available for
pirsf. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.