Registry Database of structurally defined protein interfaces
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PIBASE is a collection of all protein structural interfaces extracted from the Protein Data Bank and PQS structure databases. Both chain-chain and domain-domain (SCOP and CATH definitions) interfaces are detected.

Prefix
pibase
Keywords
protein structure
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers
Missing LUI pattern
Example Local Unique Identifier
21692   Resolve
Example CURIE
pibase:21692
Reviewer
Charles Tapley Hoyt   0000-0003-4423-4370   cthoyt
Metaregistry Database of structurally defined protein interfaces

The metaregistry provides mappings between the Bioregistry and other registries. There are 2 mappings to external registries for this resource with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
Pathguide Pathguide logo pathguide 183
Prefix Commons Prefix Commons logo prefixcommons pibase
Providers
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A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 21692 is used to demonstrate the providers available for Database of structurally defined protein interfaces. A guide for curating additional providers can be found here.

Name Metaprefix URI
Database of structurally defined protein interfaces pibase http://modbase.compbio.ucsf.edu/pibase-cgi/get_details.pl?object_type=complexes&bdp_id=21692
Bioregistry bioregistry https://bioregistry.io/pibase:21692
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/pibase:21692