The PharmGKB database is a central repository for genetic, genomic, molecular and cellular phenotype data and clinical information about people who have participated in pharmacogenomics research studies. The data includes, but is not limited to, clinical and basic pharmacokinetic and pharmacogenomic research in the cardiovascular, pulmonary, cancer, pathways, metabolic and transporter domains.
pharmgkb.disease
Local identifiers in PharmGKB Disease should match this
regular expression:
^PA\d+$
Compact URIs (CURIEs) constructed from PharmGKB Disease should match
this regular expression:
^pharmgkb\.disease:PA\d+$
A summary of the relations in the Bioregistry schema can be found here.
The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for this resource with 3 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
PHARMGKB.DISEASE
|
|
Biolink | biolink |
PHARMGKB.DISEASE
|
|
EDAM | edam |
2651
|
|
Identifiers.org | miriam |
pharmgkb.disease
|
|
N2T | n2t |
pharmgkb.disease
|
|
Prefix Commons | prefixcommons |
pharmgkb.disease
|
|
Wikidata | wikidata |
P7001
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
pharmgkb.disease:PA447218
is used to demonstrate the provides available for
this resource. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Name | Metaprefix | URI |
---|---|---|
PharmGKB Disease | pharmgkb.disease |
http://www.pharmgkb.org/disease/PA447218 |
Bioregistry | bioregistry |
https://bioregistry.io/pharmgkb.disease:PA447218 |
Identifiers.org | miriam |
https://identifiers.org/pharmgkb.disease:PA447218 |
Name-to-Thing | n2t |
https://n2t.net/pharmgkb.disease:PA447218 |
Additional providers curated in the Bioregistry are listed here.
Code | Name | URL |
---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/pharmgkb.disease:PA447218 |