Pathway Commons is a convenient point of access to biological pathway information collected from public pathway databases, which you can browse or search. It is a collection of publicly available pathways from multiple organisms that provides researchers with convenient access to a comprehensive collection of pathways from multiple sources represented in a common language.
pathwaycommons
Local identifiers in Pathway Commons should match this
regular expression:
^\d+$
Compact URIs (CURIEs) constructed from Pathway Commons should match
this regular expression:
^pathwaycommons:\d+$
The metaregistry provides mappings between the Bioregistry and other registries. There are
4 mappings to external registries for pathwaycommons
.
Registry Name | Metaprefix | External Prefix |
---|---|---|
Identifiers.org
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miriam |
pathwaycommons
|
Name-to-Thing
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n2t |
pathwaycommons
|
Prefix Commons | prefixcommons |
PATHWAYCOMMONS
|
UniProt Cross-ref database | uniprot |
PathwayCommons
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
pathwaycommons:485991
is used to demonstrate the provides available for
pathwaycommons
. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Name | Metaprefix | URI |
---|---|---|
Pathway Commons | pathwaycommons |
http://www.pathwaycommons.org/pc/record2.do?id=485991 |
Bioregistry | bioregistry |
https://bioregistry.io/pathwaycommons:485991 |
Identifiers.org | miriam |
https://identifiers.org/pathwaycommons:485991 |
Name-to-Thing | n2t |
https://n2t.net/pathwaycommons:485991 |