Registry Pathway Commons
Pathway Commons is a convenient point of access to biological pathway information collected from public pathway databases, which you can browse or search. It is a collection of publicly available pathways from multiple organisms that provides researchers with convenient access to a comprehensive collection of pathways from multiple sources represented in a common language.
- Prefix
pathwaycommons- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
-
Local identifiers in Pathway Commons should match this regular expression:
^\d+$ - Example Local Unique Identifier
- 485991 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from Pathway Commons should match this regular expression:
^pathwaycommons:\d+$ - Example CURIE
- pathwaycommons:485991
Metaregistry Pathway Commons
The metaregistry provides mappings between the Bioregistry and other registries. There are
6 mappings to external registries for pathwaycommons with
2 unique external prefixes.
| Registry Name | Metaprefix | External Prefix |
|---|---|---|
| BioContext | biocontext |
PATHWAYCOMMONS
|
Identifiers.org
|
miriam |
pathwaycommons
|
Name-to-Thing
|
n2t |
pathwaycommons
|
| Prefix Commons | prefixcommons |
pathwaycommons
|
| Registry of Research Data Repositories | re3data |
r3d100012731
|
| UniProt Cross-ref database | uniprot |
PathwayCommons
|
Providers
Providers are various services that resolve CURIEs to URLs. The example CURIE
pathwaycommons:485991
is used to demonstrate the provides available for
pathwaycommons. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
| Name | Metaprefix | URI |
|---|---|---|
| Pathway Commons | pathwaycommons |
http://www.pathwaycommons.org/pc/record2.do?id=485991 |
| Bioregistry | bioregistry |
https://bioregistry.io/pathwaycommons:485991 |
| Identifiers.org | miriam |
https://identifiers.org/pathwaycommons:485991 |
| Name-to-Thing | n2t |
https://n2t.net/pathwaycommons:485991 |