Pathway Commons is a convenient point of access to biological pathway information collected from public pathway databases, which you can browse or search. It is a collection of publicly available pathways from multiple organisms that provides researchers with convenient access to a comprehensive collection of pathways from multiple sources represented in a common language.

Prefix
pathwaycommons
Keywords
pathway
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in Pathway Commons should match this regular expression:
^\d+$

Example Local Unique Identifier
485991   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Pathway Commons should match this regular expression:
^pathwaycommons:\d+$

Example CURIE
pathwaycommons:485991
Publications
Metaregistry Pathway Commons

The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for this resource with 3 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext PATHWAYCOMMONS
Identifiers.org Identifiers.org logo miriam pathwaycommons
N2T Name-to-Thing logo n2t pathwaycommons
Prefix Commons Prefix Commons logo prefixcommons pathwaycommons
re3data Registry of Research Data Repositories logo re3data r3d100012731
UniProt UniProt Cross-ref database logo uniprot DB-0253
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE pathwaycommons:485991 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Pathway Commons pathwaycommons http://www.pathwaycommons.org/pc/record2.do?id=485991
Bioregistry bioregistry https://bioregistry.io/pathwaycommons:485991
Identifiers.org miriam https://identifiers.org/pathwaycommons:485991
Name-to-Thing n2t https://n2t.net/pathwaycommons:485991
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/pathwaycommons:485991