The PANTHER (Protein ANalysis THrough Evolutionary Relationships) Classification System is a resource that classifies genes by their functions, using published scientific experimental evidence and evolutionary relationships to predict function even in the absence of direct experimental evidence. PANTHER tree is a key element of the PANTHER System to represent ‘all’ of the evolutionary events in the gene family. PANTHER nodes represent the evolutionary events, either speciation or duplication, within the tree. PANTHER is maintaining stable identifier for these nodes.
panther.node
Local identifiers in PANTHER Node should match this
regular expression:
^PTN\d{9}$
Compact URIs (CURIEs) constructed from PANTHER Node should match
this regular expression:
^panther\.node:PTN\d{9}$
The metaregistry provides mappings between the Bioregistry and other registries. There are
3 mappings to external registries for panther.node
with
1 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
PANTHER.NODE
|
|
Identifiers.org
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miriam |
panther.node
|
|
N2T
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n2t |
panther.node
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
panther.node:PTN000000026
is used to demonstrate the provides available for
panther.node
. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Name | Metaprefix | URI |
---|---|---|
PANTHER Node | panther.node |
http://www.pantree.org/node/annotationNode.jsp?id=PTN000000026 |
Bioregistry | bioregistry |
https://bioregistry.io/panther.node:PTN000000026 |
Identifiers.org | miriam |
https://identifiers.org/panther.node:PTN000000026 |
Name-to-Thing | n2t |
https://n2t.net/panther.node:PTN000000026 |