Registry Ontology of Microbial Phenotypes

An ontology of phenotypes covering microbes

Prefix
omp
Preferred Prefix
OMP
Version
2022-04-11
Links
Homepage Repository OBO OWL
Contact
James C. Hu   0000-0001-9016-2684   jimhu-tamu
Pattern for Local Unique Identifiers

Local identifiers in Ontology of Microbial Phenotypes should match this regular expression:
^\d{7}$

Example Local Unique Identifier
0005067   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Ontology of Microbial Phenotypes should match this regular expression:
^OMP:\d{7}$

Example CURIE
OMP:0005067
Ontology
Appears In
MCO
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for omp.

Registry Name Metaprefix External Prefix
BioPortal Prefixes bioportal OMP
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.cc3f2x
OBO Foundry OBO Foundry logo obofoundry OMP
Ontology Lookup Service Ontology Lookup Service logo ols omp
OntoBee ontobee OMP
Prefix Commons prefixcommons OMP
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE omp:0005067 is used to demonstrate the provides available for omp. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Ontology of Microbial Phenotypes omp http://purl.obolibrary.org/obo/OMP_0005067
Bioregistry bioregistry https://bioregistry.io/omp:0005067
OBO Foundry obofoundry http://purl.obolibrary.org/obo/OMP_0005067
Ontology Lookup Service ols https://www.ebi.ac.uk/ols/ontologies/omp/terms?iri=http://purl.obolibrary.org/obo/OMP_0005067
BioPortal Prefixes bioportal https://bioportal.bioontology.org/ontologies/OMP/?p=classes&conceptid=http://purl.obolibrary.org/obo/OMP_0005067