An ontology of phenotypes covering microbes

Prefix

omp

Preferred Prefix

OMP

Keywords

chemical biology data analysis dataplant life sciences, biology microbe-host interaction phenotype microbial ecology microbiology obo omics ontology phenomics phenotype

Version

2024-03-25

License

CC-BY-3.0

Links

Homepage Repository OBO OWL

Contact

James C. Hu   0000-0001-9016-2684   jimhu-tamu

Pattern for Local Unique Identifiers

Local identifiers in Ontology of Microbial Phenotypes should match this regular expression:
^\d{7}$

Example Local Unique Identifier

0005067   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Ontology of Microbial Phenotypes should match this regular expression:
^OMP:\d{7}$

Example CURIE

OMP:0005067

Publications

• 2014 An ontology for microbial phenotypes
• 2019 Phenotype annotation with the ontology of microbial phenotypes (OMP)

A summary of the relations in the Bioregistry schema can be found here.

Appears In (1) (bioregistry.schema:0000018 )

MCO

In Collection

NFDI4Plant / DataPLANT Ontologies

The metaregistry provides mappings between the Bioregistry and other registries. There are 9 mappings to external registries for this resource with 3 unique external prefixes.

When using this resource in RDF, the following URI format should be used:

http://purl.obolibrary.org/obo/OMP_$1

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 0005067 is used to demonstrate the providers available for Ontology of Microbial Phenotypes. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.