Registry Ontology for genetic interval Deprecated

Suggest

An ontology that formalizes the genomic element by defining an upper class genetic interval

Prefix: ogi
Preferred Prefix: OGI
Alternative Prefixes: OGI.owl
Keywords: obo ontology
Links: Homepage OWL

Identifier Standards

Pattern for Local Unique Identifiers: Local identifiers in Ontology for genetic interval should match this regular expression:
^\d{7}$
Example Local Unique Identifier: 0000019 Resolve
Pattern for CURIES: Compact URIs (CURIEs) constructed from Ontology for genetic interval should match this regular expression:
^OGI:\d{7}$
Example CURIE: OGI:0000019
Pattern for RDF URIs: http://purl.obolibrary.org/obo/OGI_$1
Example RDF URI: http://purl.obolibrary.org/obo/OGI_0000019

Contacts

Contact: Asiyah Yu Lin 0000-0002-5379-5359 linikujp

Mappings to External Registries

Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 6 mappings to external registries with 2 unique external prefixes.

Registry Name	Registry Metaprefix	External Prefix
AberOWL	`aberowl`	`OGI`
BioContext	`biocontext`	`OGI`
BioPortal	`bioportal`	`OGI`
OBO Foundry	`obofoundry`	`ogi`
OntoBee	`ontobee`	`OGI`
Wikidata (E)	`wikidata.entity`	`Q55118520`

Providers

Suggest

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 0000019 is used to demonstrate the providers available for Ontology for genetic interval. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Provider Name	Provider Code	URI
Ontology for genetic interval	`ogi`	http://purl.obolibrary.org/obo/OGI_0000019
Ontology for genetic interval (RDF)	`rdf`	http://purl.obolibrary.org/obo/OGI_0000019
Bioregistry	`bioregistry`	https://bioregistry.io/ogi:0000019
OBO Foundry	`obofoundry`	http://purl.obolibrary.org/obo/OGI_0000019
BioPortal Prefixes	`bioportal`	https://bioportal.bioontology.org/ontologies/OGI/?p=classes&conceptid=http://purl.obolibrary.org/obo/OGI_0000019

Normalize prefixes. This can be any capitalization or punctuation variant of the synonyms listed below.

>>> import bioregistry as br
>>> br.normalize_prefix("OGI.owl")
'ogi'

Get all synonyms:

>>> import bioregistry as br
>>> br.get_synonyms("ogi")
{'OGI.owl'}

This name annotation was originally annotated in OBO Foundry and is redistributed under the CC0 license.

Get the name:

>>> import bioregistry as br
>>> br.get_name("ogi")
'Ontology for genetic interval'

Get the homepage:

>>> import bioregistry as br
>>> br.get_homepage("ogi")
'https://code.google.com/archive/p/ontology-for-genetic-interval/'

Get the OWL download link:

>>> import bioregistry as br
>>> br.get_owl_download("ogi")
'http://purl.obolibrary.org/obo/ogi.owl'

Get the contact's name:

>>> import bioregistry as br
>>> br.get_contact_name("ogi")
'Asiyah Yu Lin'

Get the contact's email:

>>> import bioregistry as br
>>> br.get_contact_email("ogi")
'linikujp@gmail.com'

Get the contact's GitHub handle:

>>> import bioregistry as br
>>> br.get_contact_github("ogi")
'linikujp'

Get the contact's ORCiD identifier:

>>> import bioregistry as br
>>> br.get_contact_orcid("ogi")
'0000-0002-5379-5359'