ACLAME is a database dedicated to the collection and classification of mobile genetic elements (MGEs) from various sources, comprising all known phage genomes, plasmids and transposons.

Alternative Prefixes
gene genome life science
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in Aclame should match this regular expression:

Example Local Unique Identifier
2   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Aclame should match this regular expression:

Example CURIE
MIRIAM Namespace Embedded in LUI
The legacy MIRIAM standard for generating CURIEs with this resource includes the namespaceEmbeddedInLUI as true. The actual part that gets prefixed before the local unique identifier regex, otherwise known as the banana, is mge:. Therefore, you might see local unique identifiers written out as CURIEs.
Metaregistry Aclame

The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for mge with 4 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext ACLAME
EDAM Ontology edam 2631
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.5tfcy8 logo miriam mge
Name-to-Thing Name-to-Thing logo n2t mge
Prefix Commons prefixcommons aclame

Providers are various services that resolve CURIEs to URLs. The example CURIE mge:2 is used to demonstrate the provides available for mge. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Aclame mge
Bioregistry bioregistry miriam
Name-to-Thing n2t