ACLAME is a database dedicated to the collection and classification of mobile genetic elements (MGEs) from various sources, comprising all known phage genomes, plasmids and transposons.
mge
Local identifiers in Aclame should match this
regular expression:
^\d+$
Compact URIs (CURIEs) constructed from Aclame should match
this regular expression:
^mge:\d+$
namespaceEmbeddedInLUI
as true. The actual
part that gets prefixed before the local unique identifier regex,
otherwise known as the banana, is
mge:
.
Therefore, you might see local unique identifiers written out as CURIEs.
The metaregistry provides mappings between the Bioregistry and other registries. There are
6 mappings to external registries for mge
with
4 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
ACLAME
|
|
EDAM Ontology | edam |
2631
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.5tfcy8
|
|
Identifiers.org
![]() |
miriam |
mge
|
|
Name-to-Thing
![]() |
n2t |
mge
|
|
Prefix Commons | prefixcommons |
aclame
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
mge:2
is used to demonstrate the provides available for
mge
. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Name | Metaprefix | URI |
---|---|---|
Aclame | mge |
http://aclame.ulb.ac.be/perl/Aclame/Genomes/mge_view.cgi?view=info&id=mge:2 |
Bioregistry | bioregistry |
https://bioregistry.io/mge:2 |
Identifiers.org | miriam |
https://identifiers.org/mge:2 |
Name-to-Thing | n2t |
https://n2t.net/mge:2 |