Registry Metabolic Atlas Reaction

A subspace of Metabolic Atlas for reactions.

Prefix

metatlas.reaction

Keywords

chemistry reactions

Links

Homepage Request Discussion

Contact

Mihail Anton 0000-0002-7753-9042 mihai-sysbio

Pattern for Local Unique Identifiers

Local identifiers in Metabolic Atlas Reaction should match this regular expression:
^MAR\d{5}$

Example Local Unique Identifier

MAR11851 Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Metabolic Atlas Reaction should match this regular expression:
^metatlas\.reaction:MAR\d{5}$

Example CURIE

metatlas.reaction:MAR11851

Contributors

submitter Mihail Anton 0000-0002-7753-9042 mihai-sysbio

Reviewer

Charles Tapley Hoyt 0000-0003-4423-4370 cthoyt

Ontology

Part Of (bfo:0000050 ): metatlas

Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE metatlas.reaction:MAR11851 is used to demonstrate the provides available for metatlas.reaction. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name	Metaprefix	URI
Metabolic Atlas Reaction	`metatlas.reaction`	https://metabolicatlas.org/identifier/MetabolicAtlas/MAR11851
Bioregistry	`bioregistry`	https://bioregistry.io/metatlas.reaction:MAR11851

Get the homepage:

>>> import bioregistry as br
>>> br.get_homepage("metatlas.reaction")
'https://metabolicatlas.org'

Get the contact's name:

>>> import bioregistry as br
>>> br.get_contact_name("metatlas.reaction")
'Mihail Anton'

Get the contact's email:

>>> import bioregistry as br
>>> br.get_contact_email("metatlas.reaction")
'mihail.anton@chalmers.se'

Get the contact's GitHub handle:

>>> import bioregistry as br
>>> br.get_contact_github("metatlas.reaction")
'mihai-sysbio'

Get the contact's ORCiD identifier:

>>> import bioregistry as br
>>> br.get_contact_orcid("metatlas.reaction")
'0000-0002-7753-9042'