A resource for exploring metabolism, starting with a set of of community-curated genome-scale metabolic models of human and model organisms, enriched with pathway maps and other tools for easy browsing and analysis.

Prefix

metatlas

Keywords

chemistry metabolites reactions

Links

Homepage Request Discussion

Contact

Mihail Anton   0000-0002-7753-9042   mihai-sysbio

Pattern for Local Unique Identifiers

Local identifiers in Metabolic Atlas should match this regular expression:
^(MAM\d{5}\w)|(MAR\d{5})$

Example Local Unique Identifiers

MAM01234c   Resolve
MAR11851   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Metabolic Atlas should match this regular expression:
^metatlas:(MAM\d{5}\w)|(MAR\d{5})$

Example CURIEs

metatlas:MAM01234c
metatlas:MAR11851

Contributors

• submitter Mihail Anton   0000-0002-7753-9042   mihai-sysbio

Reviewer

Charles Tapley Hoyt   0000-0003-4423-4370   cthoyt

A summary of the relations in the Bioregistry schema can be found here.

Has Parts (bfo:0000051 )

metatlas.metabolite metatlas.reaction

The metaregistry provides mappings between the Bioregistry and other registries. There are 1 mappings to external registries for this resource with 1 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier MAM01234c is used to demonstrate the providers available for Metabolic Atlas. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.