A resource for exploring metabolism, starting with a set of of community-curated genome-scale metabolic models of human and model organisms, enriched with pathway maps and other tools for easy browsing and analysis.

chemistry metabolites reactions
Homepage Request Discussion
Mihail Anton   0000-0002-7753-9042   mihai-sysbio
Pattern for Local Unique Identifiers

Local identifiers in Metabolic Atlas should match this regular expression:

Example Local Unique Identifiers
MAM01234c   Resolve
MAR11851   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Metabolic Atlas should match this regular expression:

Example CURIEs
Charles Tapley Hoyt   0000-0003-4423-4370   cthoyt

A summary of the relations in the Bioregistry schema can be found here.

Has Parts (bfo:0000051 )
metatlas.metabolite metatlas.reaction
Metaregistry Metabolic Atlas

The metaregistry provides mappings between the Bioregistry and other registries. There are 1 mappings to external registries for this resource with 1 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
Identifiers.org Identifiers.org logo miriam metatlas

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier MAM01234c is used to demonstrate the providers available for Metabolic Atlas. A guide for curating additional providers can be found here.

Name Metaprefix URI
Metabolic Atlas metatlas https://metabolicatlas.org/identifier/MetabolicAtlas/MAM01234c
Bioregistry bioregistry https://bioregistry.io/metatlas:MAM01234c
Identifiers.org miriam https://identifiers.org/metatlas:MAM01234c