Registry Metabolic Encyclopedia of metabolic and other pathways

MetaCyc is a curated database of experimentally elucidated metabolic pathways from all domains of life. MetaCyc contains 2526 pathways from 2844 different organisms. MetaCyc contains pathways involved in both primary and secondary metabolism, as well as associated metabolites, reactions, enzymes, and genes. The goal of MetaCyc is to catalog the universe of metabolism by storing a representative sample of each experimentally elucidated pathway.

Prefix
metacyc.compound
Alternative Prefixes
MetaCyc
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in Metabolic Encyclopedia of metabolic and other pathways should match this regular expression:
^[A-Za-z0-9+_.%-:]+$

Example Local Unique Identifier
CPD-10330   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Metabolic Encyclopedia of metabolic and other pathways should match this regular expression:
^metacyc.compound:[A-Za-z0-9+_.%-:]+$

Example CURIE
metacyc.compound:CPD-10330
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for metacyc.compound.

Registry Name Metaprefix External Prefix
Biolink Model Registry biolink MetaCyc
Gene Ontology Registry go MetaCyc
Identifiers.org miriam metacyc.compound
Name-to-Thing n2t metacyc.compound
Prefix Commons prefixcommons METACYC.COMPOUND
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE metacyc.compound:CPD-10330 is used to demonstrate the provides available for metacyc.compound. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Metabolic Encyclopedia of metabolic and other pathways metacyc.compound https://metacyc.org/compound?orgid=META&id=CPD-10330
Bioregistry bioregistry https://bioregistry.io/metacyc.compound:CPD-10330
Identifiers.org miriam https://identifiers.org/metacyc.compound:CPD-10330
Name-to-Thing n2t https://n2t.net/metacyc.compound:CPD-10330