iRefWeb is an interface to a relational database containing the latest build of the interaction Reference Index (iRefIndex) which integrates protein interaction data from ten different interaction databases: BioGRID, BIND, CORUM, DIP, HPRD, INTACT, MINT, MPPI, MPACT and OPHID. In addition, iRefWeb associates interactions with the PubMed record from which they are derived.
irefweb
Local identifiers in iRefWeb should match this
regular expression:
^\d+$
Compact URIs (CURIEs) constructed from iRefWeb should match
this regular expression:
^irefweb:\d+$
The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for this resource with 3 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
IREFWEB
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.t31wcb
|
|
Identifiers.org
![]() |
miriam |
irefweb
|
|
N2T
![]() |
n2t |
irefweb
|
|
Prefix Commons
|
prefixcommons |
irefweb
|
|
re3data
![]() |
re3data |
r3d100012725
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
None:617102
is used to demonstrate the provides available for
this resource. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Name | Metaprefix | URI |
---|---|---|
iRefWeb | irefweb |
http://wodaklab.org/iRefWeb/interaction/show/617102 |
Bioregistry | bioregistry |
https://bioregistry.io/irefweb:617102 |
Identifiers.org | miriam |
https://identifiers.org/irefweb:617102 |
Name-to-Thing | n2t |
https://n2t.net/irefweb:617102 |
Additional providers curated in the Bioregistry are listed here.
Code | Name | URL |
---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/irefweb:617102 |