IntAct provides a freely available, open source database system and analysis tools for protein interaction data.
- Prefix
intact- Keywords
- biology interaction protein
- License
- CC-BY-4.0
- Links
- Homepage
- Contact
- Kalpana Panneerselvam 0000-0003-2534-198X Kalpanapanneerselvam
- Juan Jose Medina Reyes 0009-0004-6468-260X jmedinaebi
- Identifier Space Owner
- European Bioinformatics Institute
- Pattern for Local Unique Identifiers
-
Local identifiers in IntAct protein interaction database should match this regular expression:
^EBI\-[0-9]+$ - Example Local Unique Identifier
- EBI-2307691 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from IntAct protein interaction database should match this regular expression:
^intact:EBI\-[0-9]+$ - Example CURIE
- intact:EBI-2307691
- Publications
-
- 2024 IntAct Database for Accessing IMEx's Contextual Metadata of Molecular Interactions
- 2013 The MIntAct project--IntAct as a common curation platform for 11 molecular interaction databases
- 2011 PSICQUIC and PSISCORE: accessing and scoring molecular interactions
- 2009 The IntAct molecular interaction database in 2010
- 2007 Broadening the horizon--level 2.5 of the HUPO-PSI format for molecular interactions
- 2004 IntAct: an open source molecular interaction database
- Contributors
-
- contributor Sucharitha Balu 0000-0001-7456-0594 CP-SB
Ontology
A summary of the relations in the Bioregistry schema can be found here.
- In Collection
- Synapse.org external links
Metaregistry IntAct protein interaction database
The metaregistry provides mappings between the Bioregistry and other registries. There are 11 mappings to external registries for this resource with 6 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
INTACT
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.d05nwx
|
|
GO
|
go |
IntAct
|
|
Integbio
|
integbio |
nbdc00507
|
|
Identifiers.org
|
miriam |
intact
|
|
N2T
|
n2t |
intact
|
|
Pathguide
|
pathguide |
111
|
|
Prefix Commons
|
prefixcommons |
intact
|
|
re3data
|
re3data |
r3d100010671
|
|
| TogoID | togoid |
Intact
|
|
UniProt
|
uniprot |
DB-0051
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier EBI-2307691 is used to demonstrate the providers
available for IntAct protein interaction database. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
Extra Providers
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
| Code | Name | URL |
|---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/intact:EBI-2307691 |