InnateDB is a publicly available database of the genes, proteins, experimentally-verified interactions and signaling pathways involved in the innate immune response of humans and mice to microbial infection. The database covers the innate immunity interactome by integrating known interactions and pathways from major public databases.

Prefix

innatedb

Keywords

gene genome/gene health/disease immunology interaction interaction/pathway organism pathway protein psi-mi

Links

Homepage

Publications

2012 InnateDB: systems biology of innate immunity and beyond--recent updates and continuing curation

Pattern for Local Unique Identifiers

Missing LUI pattern

Example Local Unique Identifier

20021   Resolve

Example CURIE

innatedb:20021

Contact

David Lynn   0000-0003-4664-1404

Reviewer

Charles Tapley Hoyt   0000-0003-4423-4370   cthoyt

The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for this resource with 4 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 20021 is used to demonstrate the providers available for A Knowledge Resource for Innate Immunity Interactions and Pathways. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.