InnateDB has been developed to facilitate systems level investigations of the mammalian (human, mouse and bovine) innate immune response. Its goal is to provide a manually-curated knowledgebase of the genes, proteins, and particularly, the interactions and signaling responses involved in mammalian innate immunity. InnateDB incorporates information of the whole human, mouse and bovine interactomes by integrating interaction and pathway information from several of the major publicly available databases but aims to capture an improved coverage of the innate immunity interactome through manual curation.

Prefix

innatedb

Keywords

gene immunology interaction life science pathway protein

Links

Homepage @innatedb

Contact

Missing Contact

Pattern for Local Unique Identifiers

Missing LUI pattern

Example Local Unique Identifier

20021   Resolve

Example CURIE

innatedb:20021

Publications

2012 InnateDB: systems biology of innate immunity and beyond--recent updates and continuing curation.

Reviewer

Charles Tapley Hoyt   0000-0003-4423-4370   cthoyt

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for innatedb with 3 unique external prefixes.

Providers are various services that resolve CURIEs to URLs. The example CURIE innatedb:20021 is used to demonstrate the provides available for innatedb. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Additional providers curated in the Bioregistry are listed here.