HAMAP is a system that identifies and semi-automatically annotates proteins that are part of well-conserved and orthologous microbial families or subfamilies. These are used to build rules which are used to propagate annotations to member bacterial, archaeal and plastid-encoded protein entries.

Prefix

hamap

Links

Homepage

Contact

Missing Contact

Pattern for Local Unique Identifiers

Local identifiers in High-quality Automated and Manual Annotation of microbial Proteomes should match this regular expression:
^MF_\d+$

Example Local Unique Identifier

MF_01400   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from High-quality Automated and Manual Annotation of microbial Proteomes should match this regular expression:
^hamap:MF_\d+$

Example CURIE

hamap:MF_01400

The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for hamap.

Providers are various services that resolve CURIEs to URLs. The example CURIE hamap:MF_01400 is used to demonstrate the provides available for hamap. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.