HAMAP is a system that identifies and semi-automatically annotates proteins that are part of well-conserved and orthologous microbial families or subfamilies. These are used to build rules which are used to propagate annotations to member bacterial, archaeal and plastid-encoded protein entries.
hamap
Local identifiers in High-quality Automated and Manual Annotation of microbial Proteomes should match this
regular expression:
^MF_\d+$
Compact URIs (CURIEs) constructed from High-quality Automated and Manual Annotation of microbial Proteomes should match
this regular expression:
^hamap:MF_\d+$
The metaregistry provides mappings between the Bioregistry and other registries. There are
6 mappings to external registries for hamap
.
Registry Name | Metaprefix | External Prefix |
---|---|---|
FAIRSharing
|
fairsharing |
FAIRsharing.63m4ss
|
Gene Ontology Registry | go |
HAMAP
|
Identifiers.org
![]() |
miriam |
hamap
|
Name-to-Thing
![]() |
n2t |
hamap
|
Prefix Commons | prefixcommons |
HAMAP
|
UniProt Cross-ref database | uniprot |
HAMAP
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
hamap:MF_01400
is used to demonstrate the provides available for
hamap
. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.