HAMAP is a system that identifies and semi-automatically annotates proteins that are part of well-conserved and orthologous microbial families or subfamilies. These are used to build rules which are used to propagate annotations to member bacterial, archaeal and plastid-encoded protein entries.
Local identifiers in High-quality Automated and Manual Annotation of microbial Proteomes should match this
Compact URIs (CURIEs) constructed from High-quality Automated and Manual Annotation of microbial Proteomes should match
this regular expression:
The metaregistry provides mappings between the Bioregistry and other registries. There are
6 mappings to external registries for
|Registry Name||Metaprefix||External Prefix|
|Gene Ontology Registry||
|UniProt Cross-ref database||
Providers are various services that resolve CURIEs to URLs. The example CURIE
hamap:MF_01400 is used to demonstrate the provides available for
hamap. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
|High-quality Automated and Manual Annotation of microbial Proteomes||