Genetree displays the maximum likelihood phylogenetic (protein) trees representing the evolutionary history of the genes. These are constructed using the canonical protein for every gene in Ensembl.

Prefix
genetree
Links
Homepage
Contact
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Pattern for Local Unique Identifiers

Local identifiers in GeneTree should match this regular expression:
^ENSGT\d+$

Example Local Unique Identifier
ENSGT00550000074763   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from GeneTree should match this regular expression:
^genetree:ENSGT\d+$

Example CURIE
genetree:ENSGT00550000074763
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for genetree.

Registry Name Metaprefix External Prefix
Identifiers.org miriam genetree
Name-to-Thing n2t genetree
Prefix Commons prefixcommons GENETREE
UniProt Cross-ref database uniprot GeneTree
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE genetree:ENSGT00550000074763 is used to demonstrate the provides available for genetree. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
GeneTree genetree http://www.ensembl.org/Multi/GeneTree/Image?db=core;gt=ENSGT00550000074763
Bioregistry bioregistry https://bioregistry.io/genetree:ENSGT00550000074763
Identifiers.org miriam https://identifiers.org/genetree:ENSGT00550000074763
Name-to-Thing n2t https://n2t.net/genetree:ENSGT00550000074763