Genetree displays the maximum likelihood phylogenetic (protein) trees representing the evolutionary history of the genes. These are constructed using the canonical protein for every gene in Ensembl.
genetree
Local identifiers in GeneTree should match this
regular expression:
^ENSGT\d+$
Compact URIs (CURIEs) constructed from GeneTree should match
this regular expression:
^genetree:ENSGT\d+$
The metaregistry provides mappings between the Bioregistry and other registries. There are
5 mappings to external registries for genetree
with
2 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
GENETREE
|
|
Identifiers.org
![]() |
miriam |
genetree
|
|
N2T
![]() |
n2t |
genetree
|
|
Prefix Commons
|
prefixcommons |
genetree
|
|
UniProt
|
uniprot |
DB-0162
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
genetree:ENSGT00550000074763
is used to demonstrate the provides available for
genetree
. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Additional providers curated in the Bioregistry are listed here.
Code | Name | URL |
---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/genetree:ENSGT00550000074763 |