The VEuPathDB ontology is an application ontology developed to encode our understanding of what data is about in the public resources developed and maintained by the Eukaryotic Pathogen, Host and Vector Genomics Resource (VEuPathDB; https://veupathdb.org). The VEuPathDB ontology was previously named the EuPathDB ontology prior to EuPathDB joining with VectorBase.The ontology was built based on the Ontology of Biomedical Investigations (OBI) with integration of other OBO ontologies such as PATO, OGMS, DO, etc. as needed for coverage. Currently the VEuPath ontology is primarily intended to be used for support of the VEuPathDB sites. Terms with VEuPathDB ontology IDs that are not specific to VEuPathDB will be submitted to OBO Foundry ontologies for subsequent import and replacement of those terms when they are available.
Local identifiers in VEuPathDB ontology should match this
Compact URIs (CURIEs) constructed from VEuPathDB ontology should match
this regular expression:
The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for this resource with 2 unique external prefixes.
|Registry Name||Registry Metaprefix||External Prefix||Curate|
When using this resource in RDF, the following URI format should be used:
Providers are various services that resolve CURIEs to URLs. The example CURIE
is used to demonstrate the provides available for
this resource. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
|VEuPathDB ontology (RDF)||
|Ontology Lookup Service||