ClinVar archives reports of relationships among medically important variants and phenotypes. It records human variation, interpretations of the relationship specific variations to human health, and supporting evidence for each interpretation. Each ClinVar record (RCV identifier) represents an aggregated view of interpretations of the same variation and condition from one or more submitters. Submissions for individual variation/phenotype combinations (SCV identifier) are also collected and made available separately. This collection references the Variant identifier.

Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in ClinVar Variation should match this regular expression:

Example Local Unique Identifier
12345   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from ClinVar Variation should match this regular expression:

Example CURIE
Metaregistry ClinVar Variation

The metaregistry provides mappings between the Bioregistry and other registries. There are 9 mappings to external registries for clinvar with 5 unique external prefixes.

Registry Name Metaprefix External Prefix
BioContext biocontext ClinVar
Biolink Model Registry biolink CLINVAR
Cellosaurus Registry cellosaurus ClinVar
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.wx5r6f
HL7 External Code Systems hl7 clinVar-V logo miriam clinvar
Name-to-Thing Name-to-Thing logo n2t clinvar
Registry of Research Data Repositories re3data r3d100013331
Wikidata Property Wikidata Property logo wikidata P1929

Providers are various services that resolve CURIEs to URLs. The example CURIE clinvar:12345 is used to demonstrate the provides available for clinvar. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
ClinVar Variation clinvar
Bioregistry bioregistry miriam
Name-to-Thing n2t