CIViC variants are usually genomic alterations, including single nucleotide variants (SNVs), insertion/deletion events (indels), copy number alterations (CNV’s such as amplification or deletion), structural variants (SVs such as translocations and inversions), and other events that differ from the “normal” genome. In some cases a CIViC variant may represent events of the transcriptome or proteome. For example, ‘expression’ or ‘over-expression’ is a valid variant. Regardless of the variant, it must have a Predictive, Prognostic, Predisposing, Diagnostic, Oncogenic, or Functional relevance that is clinical in nature to be entered in CIViC. i.e. There must be some rationale for why curation of this variant could ultimately aid clinical decision making.

Prefix
civic.vid
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in CIViC Variant should match this regular expression:
^[0-9]+$

Example Local Unique Identifier
12   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from CIViC Variant should match this regular expression:
^civic\.vid:[0-9]+$

Example CURIE
civic.vid:12
Metaregistry CIViC Variant

The metaregistry provides mappings between the Bioregistry and other registries. There are 1 mappings to external registries for civic.vid with 1 unique external prefixes.

Registry Name Metaprefix External Prefix
Identifiers.org Identifiers.org logo miriam civic.vid
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE civic.vid:12 is used to demonstrate the provides available for civic.vid. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
CIViC Variant civic.vid https://civicdb.org/links/variant/12
Bioregistry bioregistry https://bioregistry.io/civic.vid:12
Identifiers.org miriam https://identifiers.org/civic.vid:12