appears_in: []
contact:
  email: murphyte@ncbi.nlm.nih.gov
  github: murphyte
  name: Terence D. Murphy
  orcid: 0000-0001-9311-9745
depends_on: []
deprecated: false
description: The Consensus CDS (CCDS) project is a collaborative effort to identify
  a core set of human and mouse protein coding regions that are consistently annotated
  and of high quality. The CCDS set is calculated following coordinated whole genome
  annotation updates carried out by the NCBI, WTSI, and Ensembl. The long term goal
  is to support convergence towards a standard set of gene annotations.
example: CCDS12976
example_extras:
- CCDS12976.1
homepage: http://www.ncbi.nlm.nih.gov/CCDS/
keywords:
- gene
- genome/gene
- protein
- sequence
- sequence databases
mappings:
  biocontext: CCDS
  integbio: nbdc00023
  miriam: ccds
  n2t: ccds
  prefixcommons: ccds
  togoid: Ccds
  uniprot: DB-0187
name: Consensus CDS
namespace_in_lui: false
pattern: ^CCDS\d+(\.\d+)?$
preferred_prefix: ccds
prefix: ccds
providers:
- code: bio2rdf
  description: Bio2RDF is an open-source project that uses Semantic Web technologies
    to build and provide the largest network of Linked Data for the Life Sciences.
    Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked
    Data from a diverse set of heterogeneously formatted sources obtained from multiple
    data providers.
  homepage: https://bio2rdf.org
  name: Bio2RDF
  uri_format: http://bio2rdf.org/ccds:$1
publications:
- doi: 10.1093/nar/gkx1031
  pubmed: '29126148'
- doi: 10.1101/gr.080531.108
  pmc: PMC2704439
  pubmed: '19498102'
  title: 'The consensus coding sequence (CCDS) project: Identifying a common protein-coding
    gene set for the human and mouse genomes'
  year: 2009
synonyms: []
uri_format: http://www.ncbi.nlm.nih.gov/CCDS/CcdsBrowse.cgi?REQUEST=CCDS&DATA=$1
