The NCBI BioSystems database centralizes and cross-links existing biological systems databases, increasing their utility and target audience by integrating their pathways and systems into NCBI resources.

Prefix

biosystems

Keywords

biology molecules pathways systems biology

Links

Homepage

Contact

Aron Marchler-Bauer   0000-0003-1516-0712

Pattern for Local Unique Identifiers

Local identifiers in BioSystems should match this regular expression:
^\d+$

Example Local Unique Identifier

001   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from BioSystems should match this regular expression:
^biosystems:\d+$

Example CURIE

biosystems:001

Publications

2009 The NCBI BioSystems database

Contributors

• contributor Egon Willighagen   0000-0001-7542-0286   egonw

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for this resource with 4 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 001 is used to demonstrate the providers available for BioSystems. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.